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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34954674_34956132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34954674 - 34956132

Intron Length:

1459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTACGTATA

5'SS Class:

major

3'SS Sequence:

TCTCGCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACAAA

U12 Branch Point Sequence:

TCTCGCTCCACA

Flanking Amino Acid:

GNNEEKSGSSSGQRTRKKRC

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

72.3

39.1

Major BPS

46.4

-0.2

1.3

51.1

Major PPT

74.9

0.56

0.8

68.3

32.1

Minor 5ss

40.4

-1.1

56.2

42.2

Minor BPS

44.9

-0.4

2.3

60.78

45.1

Associated Gene:

Gene:

HOXA11

Ensembl Gene ID:

ENSAPLG00000011282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043390

34953527 - 34956796

3270

ENSAPLT00000011740

34954357 - 34956796

2440