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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34985747_34987253_F

Intron Information:

Intron Rank:

138380

Intron Class:

major

Intron Phase:

Intron Coordinates:

34985747 - 34987253

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCAGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTTTCAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

87.9

0.85

0.8

86.1

26.7

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

58.9

0.28

1.7

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037043

34983743 - 34987299

3557