About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_35073888_35075635_F


Intron Information:

Intron Rank:
142100

Intron Class:
major

Intron Phase:

Intron Coordinates:
35073888 - 35075635

Intron Length:
1748

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAATTC

5'SS Class:
major

3'SS Sequence:
ATAATCCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATAAT

U12 Branch Point Sequence:
CTTGTAATAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
71
33.6

Major BPS
80
0.75
1
78.6
31

Major PPT
73.4
0.53
1
63.1
43.2

Minor 5ss
47.9
-0.2
2.9
67.6
43.7

Minor BPS
46.4
-0.2
1.9
59.52
40.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35070942 - 35075743
4802