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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35224506_35232076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

35224506 - 35232076

Intron Length:

7571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ACTTACATGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.4

32.4

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

86.1

0.81

0.8

81.1

35.9

Minor 5ss

35.9

-1.6

2.7

43.9

43.8

Minor BPS

51.2

0.12

1.8

71.27

39.7

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011152

35224244 - 35285344

61101