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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35245966_35248265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35245966 - 35248265

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTTTCTTCAAAT

Flanking Amino Acid:

STVNCVLTFQGYYLPNDDGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

73.5

33.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

78.4

0.64

0.9

76.6

37.5

Minor 5ss

33.5

-1.9

2.9

40.8

45.4

Minor BPS

0.58

1.6

82.62

38.2

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011152

35224244 - 35285344

61101

ENSAPLT00000032905

35229261 - 35285559

56299

ENSAPLT00000029483

35229261 - 35285344

56084

ENSAPLT00000029111

35232077 - 35285778

53702

ENSAPLT00000023603

35229261 - 35285344

56084

ENSAPLT00000044573

35229261 - 35285559

56299