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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35249628_35260643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35249628 - 35260643

Intron Length:

11016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

RCDQLQTEQKANIQASETLK

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

79.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

74.7

0.56

1.1

38.4

Minor 5ss

38.3

-1.3

2.8

50.9

45.4

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029483

35229261 - 35285344

56084

ENSAPLT00000029111

35232077 - 35285778

53702

ENSAPLT00000023603

35229261 - 35285344

56084

ENSAPLT00000044573

35229261 - 35285559

56299

ENSAPLT00000011152

35224244 - 35285344

61101

ENSAPLT00000032905

35229261 - 35285559

56299