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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35261021_35265000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35261021 - 35265000

Intron Length:

3980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATCAATT

Flanking Amino Acid:

TEKDEKELYKEDASVLKEQL

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

84.1

30.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.5

0.69

0.8

75.4

33.1

Minor 5ss

49.3

-0

2.5

67.2

43.9

Minor BPS

49.5

0.04

2.2

75.99

40.7

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029483

35229261 - 35285344

56084