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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35268278_35269704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35268278 - 35269704

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TGAACCACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

AAATGCTTAATG

Flanking Amino Acid:

KYKKCKQMLAGEKMKCSVYA

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

69.2

0.48

1.3

71.9

Major PPT

60.1

0.23

51.9

37.7

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

57.8

0.11

1.8

59.95

41.9

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011152

35224244 - 35285344

61101

ENSAPLT00000044573

35229261 - 35285559

56299

ENSAPLT00000032905

35229261 - 35285559

56299

ENSAPLT00000029483

35229261 - 35285344

56084

ENSAPLT00000029111

35232077 - 35285778

53702