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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35269831_35276361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35269831 - 35276361

Intron Length:

6531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACATTTTAAACT

Flanking Amino Acid:

QLAAKEDQYKELGRTPGNQA

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.5

0.57

0.9

74.5

40.1

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

57.1

0.3

1.6

70.07

41.4

Associated Gene:

Gene:

TAX1BP1

Ensembl Gene ID:

ENSAPLG00000010659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032905

35229261 - 35285559

56299