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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35792348_35793015_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
35792348 - 35793015

Intron Length:
668

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCGAGCT

5'SS Class:
major

3'SS Sequence:
ATTTCTTTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTTAA

U12 Branch Point Sequence:
AACTCTCTATTT

Flanking Amino Acid:
ELTQTNMQLQNEVSMLKNEV

Intron Amino Acid Position:
412

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
68.8
36.1

Major BPS
78.5
0.71
0.9
69.7
37.1

Major PPT
84.8
0.78
0.7
77.9
35.9

Minor 5ss
26.6
-2.7
3.4
39.3
46.1

Minor BPS
47.6
-0.1
1.9
63.86
41

Associated Gene:

Gene:
CREB5

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35699123 - 35794277
95155

35584734 - 35794277
209544