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Intron Name: Anas_platyrhynchos_platyrhynchos_2_35949933_36015802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35949933 - 36015802

Intron Length:

65870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CCCTTTTTACTT

Flanking Amino Acid:

SSLSGSSVSSDAEEYQPPIW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

82.6

31.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.1

0.68

0.9

76.9

36.6

Minor 5ss

45.2

-0.5

2.8

62.5

42.2

Minor BPS

0.08

1.6

61.64

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044574

35949884 - 36111027

161144

ENSAPLT00000032394

35949884 - 36063128

113245