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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36087255_36093840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36087255 - 36093840

Intron Length:

6586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCTGTTTGTATT

Flanking Amino Acid:

FNYEKAHNFKVHTFRGPHWC

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

76.2

39.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

80.5

0.69

0.9

74.1

40.3

Minor 5ss

39.9

-1.1

3.4

49.2

Minor BPS

45.7

-0.2

1.8

63.05

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045303

35879485 - 36111027

231543

ENSAPLT00000044574

35949884 - 36111027

161144

ENSAPLT00000004928

35999942 - 36111027

111086