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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36198401_36200694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36198401 - 36200694

Intron Length:

2294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTTATT

Flanking Amino Acid:

HYFTGTPDPSRSIFKPFIFV

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.6

0.76

0.8

81.6

34.5

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

60.6

0.42

1.9

81.15

40.6

Associated Gene:

Gene:

SCRN1

Ensembl Gene ID:

ENSAPLG00000004515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036441

36196045 - 36220110

24066

ENSAPLT00000004644

36196583 - 36220110

23528