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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36200861_36202451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36200861 - 36202451

Intron Length:

1591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAC

U12 Branch Point Sequence:

CACACAGGAATT

Flanking Amino Acid:

SGRESLEKQGGDVSAQTMID

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

68.8

42.2

Major BPS

51.2

0.03

0.9

58.7

27.5

Major PPT

72.4

0.51

0.9

32.2

Minor 5ss

40.1

-1.1

3.4

52.3

45.8

Minor BPS

-0.7

2.2

51.75

42.7

Associated Gene:

Gene:

SCRN1

Ensembl Gene ID:

ENSAPLG00000004515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004644

36196583 - 36220110

23528

ENSAPLT00000036441

36196045 - 36220110

24066