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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36209327_36219840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36209327 - 36219840

Intron Length:

10514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

TCTTCCCCAATG

Flanking Amino Acid:

ATHDPGSKVECTYIEIEQVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

58.9

0.22

1.3

58.4

Major PPT

72.5

0.51

0.9

66.7

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

53.7

-0

64.35

43.7

Associated Gene:

Gene:

SCRN1

Ensembl Gene ID:

ENSAPLG00000004515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036441

36196045 - 36220110

24066

ENSAPLT00000004644

36196583 - 36220110

23528