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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36245148_36252846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36245148 - 36252846

Intron Length:

7699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AGAGAAGTAACT

Flanking Amino Acid:

VLYKWTNYLSGWQPRWFLLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

-0.6

2.3

58.5

43.7

Associated Gene:

Gene:

PLEKHA8

Ensembl Gene ID:

ENSAPLG00000004301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004422

36245060 - 36270660

25601