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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36259803_36260189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36259803 - 36260189

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGTACAT

5'SS Class:

major

3'SS Sequence:

TCCTGGATGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTGTCCTGGATG

Flanking Amino Acid:

FPTFFSVMSNRFSDIELREE

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

64.4

41.5

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

62.1

0.27

1.1

44.8

Minor 5ss

32.3

-2

3.4

47.5

47.9

Minor BPS

62.5

0.25

1.6

67.05

41.2

Associated Gene:

Gene:

PLEKHA8

Ensembl Gene ID:

ENSAPLG00000004301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004422

36245060 - 36270660

25601