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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36260874_36261952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36260874 - 36261952

Intron Length:

1079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

VKMDFVGNIKKINQKFITNK

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

PLEKHA8

Ensembl Gene ID:

ENSAPLG00000004301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004422

36245060 - 36270660

25601