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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36292872_36293882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36292872 - 36293882

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TCATTCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GAAGCATTAAAA

Flanking Amino Acid:

PGTRGPMGSKGFPGTRGEKG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

76.7

0.6

0.8

74.6

30.4

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

48.9

-0

1.8

57.36

40.9

Associated Gene:

Gene:

COLQ

Ensembl Gene ID:

ENSAPLG00000004158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004275

36275525 - 36314733

39209