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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36338772_36342514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36338772 - 36342514

Intron Length:

3743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

ATCTTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATCTTTTCAACA

Flanking Amino Acid:

KYIGMRNEQAACYAASAIGY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.6

0.62

0.9

73.8

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

61.5

0.36

1.5

69.17

37.5

Associated Gene:

Gene:

HACL1

Ensembl Gene ID:

ENSAPLG00000003680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003801

36325379 - 36343542

18164