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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36345293_36346508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

36345293 - 36346508

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTCCCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

GGCCCCCCACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

75.1

35.1

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

82.5

0.73

0.7

73.9

31.2

Minor 5ss

33.2

-1.9

2.6

32.9

Minor BPS

40.4

-0.7

46.77

41.6

Associated Gene:

Gene:

BTD

Ensembl Gene ID:

ENSAPLG00000003612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047037

36345244 - 36351456

6213