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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_36368134_36368229_R

Intron Information:

Intron Rank:
20
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
36368134 - 36368229
Intron Length:
96

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGT|GTAAGGAAG
5'SS Class:
major
3'SS Sequence:
TAATTCTTTATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATCAT
U12 Branch Point Sequence:
GTCTGTTTAATT
Flanking Amino Acid:
GNSFSPLHCAVINDNEGAAE
Intron Amino Acid Position:
776

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
68.5
0.44
1.2
62.5
43.5
Major BPS
88.2
0.95
0.9
88.3
28.5
Major PPT
78.7
0.65
0.8
73.4
36.6
Minor 5ss
33.6
-1.9
3.2
40.5
45.5
Minor BPS
62.1
0.46
1.8
75.88
41.7

Associated Gene:

Gene:
ANKRD28
Ensembl Gene ID:
ENSAPLG00000002501
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041612
36360481 - 36435288
74808
ENSAPLT00000040748
36360481 - 36475034
114554
ENSAPLT00000002624
36360771 - 36435288
74518