Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_36374259_36374607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36374259 - 36374607

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACTCACT

Flanking Amino Acid:

LIASETPLDVLMETSGTDML

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

82.1

0.72

0.9

24.1

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

54.8

0.23

2.3

86.18

39.4

Associated Gene:

Gene:

ANKRD28

Ensembl Gene ID:

ENSAPLG00000002501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002624

36360771 - 36435288

74518

ENSAPLT00000041612

36360481 - 36435288

74808

ENSAPLT00000040748

36360481 - 36475034

114554