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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36774171_36774709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36774171 - 36774709

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTTTCTTAATT

Flanking Amino Acid:

VGYQPAYNYQVQPQWVPGEQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.49

1.1

75.6

37.9

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008053

36769193 - 36785873

16681