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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36776237_36776563_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

36776237 - 36776563

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GCCTTAAAACAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTGCCTTAAAA

Flanking Amino Acid:

GPAIRKQQNLCSYVQPRPLV

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

48.3

-0.1

1.1

43.7

39.7

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

77.4

0.86

1.4

84.76

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008053

36769193 - 36785873

16681