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Intron Name: Anas_platyrhynchos_platyrhynchos_2_36854677_36863306_F

Intron Information:

Intron Rank:

142936

Intron Class:

major

Intron Phase:

Intron Coordinates:

36854677 - 36863306

Intron Length:

8630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CCTAAATTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

72.7

0.57

72.1

31.1

Major PPT

82.2

0.72

0.9

76.8

37.3

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

43.8

-0.4

53.01

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021191

36808579 - 36863389

54811