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Intron Name: Anas_platyrhynchos_platyrhynchos_2_37137487_37143238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37137487 - 37143238

Intron Length:

5752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATGT

Flanking Amino Acid:

RENEQLLYKQGMHELLAPIV

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.9

82.1

34.6

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

54.4

0.21

1.9

74.38

43.4

Associated Gene:

Gene:

TBC1D5

Ensembl Gene ID:

ENSAPLG00000015790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026573

37010967 - 37328319

317353

ENSAPLT00000025006

37011079 - 37327976

316898

ENSAPLT00000016512

37010967 - 37296089

285123

ENSAPLT00000046012

37011079 - 37251770

240692