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Intron Name: Anas_platyrhynchos_platyrhynchos_2_37197038_37251709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37197038 - 37251709

Intron Length:

54672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TGTTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

GAAACACTGAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.4

63.2

43.4

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

85.9

0.81

0.7

84.9

29.9

Minor 5ss

34.5

-1.8

3.2

42.8

37.9

Minor BPS

39.7

-0.7

52.86

41.2

Associated Gene:

Gene:

TBC1D5

Ensembl Gene ID:

ENSAPLG00000015790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046012

37011079 - 37251770

240692

ENSAPLT00000016512

37010967 - 37296089

285123