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Intron Name: Anas_platyrhynchos_platyrhynchos_2_37578102_37586353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37578102 - 37586353

Intron Length:

8252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

CTGTCCAGCATT

Flanking Amino Acid:

FARVAFNRTQGLLSEILRKE

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

75.2

0.57

0.7

25.7

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

45.2

-0.3

2.1

65.38

45.4

Associated Gene:

Gene:

SATB1

Ensembl Gene ID:

ENSAPLG00000009362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009759

37544218 - 37613766

69549

ENSAPLT00000047546

37546687 - 37613766

67080

ENSAPLT00000029467

37544218 - 37617553

73336