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Intron Name: Anas_platyrhynchos_platyrhynchos_2_37613767_37616654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37613767 - 37616654

Intron Length:

2888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGAATCATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

60.8

0.24

1.1

55.4

44.2

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

69.9

0.6

1.3

78.42

30.8

Associated Gene:

Gene:

SATB1

Ensembl Gene ID:

ENSAPLG00000009362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029467

37544218 - 37617553

73336