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Intron Name: Anas_platyrhynchos_platyrhynchos_2_37892148_37895506_F

Intron Information:

Intron Rank:

140077

Intron Class:

major

Intron Phase:

Intron Coordinates:

37892148 - 37895506

Intron Length:

3359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTCC

5'SS Class:

major

3'SS Sequence:

GTTATTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGTTGTTATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

62.8

38.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.1

0.52

0.9

70.3

41.2

Minor 5ss

38.3

-1.3

3.2

50.4

46.4

Minor BPS

-0.3

2.3

58.01

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021241

37888842 - 37895666

6825