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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38205909_38208855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

38205909 - 38208855

Intron Length:

2947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCAAATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CATTGCTTAGCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

72.8

38.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

61.6

0.26

58.3

41.8

Minor 5ss

32.5

-2

3.2

40.9

45.4

Minor BPS

58.1

0.33

2.1

77.03

45.3

Associated Gene:

Gene:

PP2D1

Ensembl Gene ID:

ENSAPLG00000012677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013189

38205774 - 38213860

8087