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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38235894_38240881_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
38235894 - 38240881

Intron Length:
4988

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGATTT

5'SS Class:
strong_major

3'SS Sequence:
TTATTTCATTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTATTTCATT

Flanking Amino Acid:
EPCRSCSHTLAAHVSHLENV

Intron Amino Acid Position:
169

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.2
1.04
0.7
90.6
21.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
79.1
0.66
0.9
78.8
34.6

Minor 5ss
43.9
-0.7
3.2
64.8
46.5

Minor BPS
61.3
0.44
1.9
84.41
36.8

Associated Gene:

Gene:
KAT2B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

38218104 - 38271414
53311