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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38276820_38277049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38276820 - 38277049

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

ATTTTCTTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

ATTTTCTTGACA

Flanking Amino Acid:

AKDFCAVGGVNQRVLSSVLE

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.3

34.1

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

80.2

0.68

76.8

36.8

Minor 5ss

38.9

-1.3

2.7

34.4

Minor BPS

80.5

0.95

84.28

28.2

Associated Gene:

Gene:

SGO1

Ensembl Gene ID:

ENSAPLG00000012083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012570

38274089 - 38278018

3930

ENSAPLT00000045230

38273657 - 38277851

4195