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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38277158_38277421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38277158 - 38277421

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTTA

5'SS Class:

major

3'SS Sequence:

TTGTTGTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAACAAT

U12 Branch Point Sequence:

TTGTTGTCATTA

Flanking Amino Acid:

YFKQAQELVETKLSALSEII

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.6

Major BPS

-0.1

1.3

54.7

37.2

Major PPT

71.3

0.48

71.3

39.5

Minor 5ss

49.9

-0

2.4

67.2

43.9

Minor BPS

43.3

-0.5

2.3

58.45

42.1

Associated Gene:

Gene:

SGO1

Ensembl Gene ID:

ENSAPLG00000012083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045230

38273657 - 38277851

4195

ENSAPLT00000012570

38274089 - 38278018

3930