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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38277852_38277976_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

38277852 - 38277976

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTCCGTGCT

5'SS Class:

weak_major

3'SS Sequence:

TATGTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

ATGTTTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.4

54.9

40.6

Major BPS

69.2

0.48

1.3

71.9

Major PPT

74.4

0.55

1.1

74.8

38.8

Minor 5ss

31.7

-2.1

3.4

42.6

44.1

Minor BPS

61.4

0.22

1.5

62.24

Associated Gene:

Gene:

SGO1

Ensembl Gene ID:

ENSAPLG00000012083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012570

38274089 - 38278018

3930