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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3828452_3829633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3828452 - 3829633

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGTAC

5'SS Class:

major

3'SS Sequence:

GTTTCTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATTGGTAAAA

Flanking Amino Acid:

MKETAGIVRRNCTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

Major BPS

100

1.24

0.5

100

Major PPT

83.5

0.75

0.9

80.8

36.8

Minor 5ss

31.6

-2.1

3.2

40.7

45.8

Minor BPS

42.2

-0.6

2.5

56.42

42.9

Associated Gene:

Gene:

GHRHR

Ensembl Gene ID:

ENSAPLG00000011541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022346

3813235 - 3831497

18263

ENSAPLT00000026665

3813334 - 3832911

19578