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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3833580_3847238_F

Intron Information:

Intron Rank:

143426

Intron Class:

major

Intron Phase:

Intron Coordinates:

3833580 - 3847238

Intron Length:

13659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CTAACCTAAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

84.6

0.86

41.2

Major PPT

0.77

0.8

77.1

37.1

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

48.7

-0.2

1.9

54.3

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036868

3833354 - 3850275

16922