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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38406873_38407711_R

Intron Information:

Intron Rank:

144496

Intron Class:

major

Intron Phase:

Intron Coordinates:

38406873 - 38407711

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

TTTATATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATCCCAATAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

86.9

0.83

0.8

81.6

34.9

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

46.3

-0.2

1.9

59.35

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027001

38406670 - 38410345

3676