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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38515147_38516068_R

Intron Information:

Intron Rank:
138427
Intron Class:
major
Intron Phase:
Intron Coordinates:
38515147 - 38516068
Intron Length:
922

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAGAAAAT
5'SS Class:
major
3'SS Sequence:
TTTCTTATGACAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTTAT
U12 Branch Point Sequence:
TTTTTCTTATGA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.5
0.58
1
74
36.4
Major BPS
91.4
1.03
0.7
79.9
34.9
Major PPT
79.8
0.67
1
77
36
Minor 5ss
33.1
-1.9
3.4
48
47.7
Minor BPS
63.9
0.43
1.9
78.51
38.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000022000
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000033385
38512640 - 38516682
4043