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Intron Name: Anas_platyrhynchos_platyrhynchos_2_38566750_38566989_F

Intron Information:

Intron Rank:

132093

Intron Class:

major

Intron Phase:

Intron Coordinates:

38566750 - 38566989

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGTTATTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

91.5

0.93

0.6

89.8

18.5

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

60.6

0.41

1.6

77.49

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025650

38554144 - 38567075

12932