Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38655029 - 38659198

Intron Length:

4170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CTTTTCCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTTCCCCACAG

Flanking Amino Acid:

KLQKGTHPLGVKLVFSKEPS

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

42.7

Major BPS

68.1

0.45

58.1

38.5

Major PPT

82.2

0.73

0.7

76.7

25.5

Minor 5ss

36.7

-1.5

39.2

46.1

Minor BPS

45.8

-0.4

2.2

45.2

Associated Gene:

Gene:

ZNF385D

Ensembl Gene ID:

ENSAPLG00000011365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030701

38653080 - 38818407

165328

ENSAPLT00000035325

38653080 - 38818407

165328

ENSAPLT00000044739

38654795 - 38854461

199667

ENSAPLT00000026013

38654326 - 38892141

237816

ENSAPLT00000033001

38654326 - 38912237

257912

ENSAPLT00000035917

38654795 - 38852391

197597

ENSAPLT00000011818

38654795 - 38891123

236329

ENSAPLT00000031648

38653080 - 38775833

122754

ENSAPLT00000030968

38654326 - 38900699

246374

ENSAPLT00000035896

38654795 - 38998807

344013

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38655029_38659198_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: