Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38659301 - 38660700

Intron Length:

1400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAGC

5'SS Class:

major

3'SS Sequence:

TGTATTTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TGTATTTTAACA

Flanking Amino Acid:

HVNSETQLKQHISSRRHKDR

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

60.1

44.8

Major BPS

71.8

0.54

1.2

32.5

Major PPT

77.7

0.62

73.4

40.7

Minor 5ss

38.7

-1.3

3.1

52.7

Minor BPS

71.7

0.68

1.2

76.38

34.4

Associated Gene:

Gene:

ZNF385D

Ensembl Gene ID:

ENSAPLG00000011365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030968

38654326 - 38900699

246374

ENSAPLT00000035896

38654795 - 38998807

344013

ENSAPLT00000030701

38653080 - 38818407

165328

ENSAPLT00000035325

38653080 - 38818407

165328

ENSAPLT00000026013

38654326 - 38892141

237816

ENSAPLT00000033001

38654326 - 38912237

257912

ENSAPLT00000044739

38654795 - 38854461

199667

ENSAPLT00000011818

38654795 - 38891123

236329

ENSAPLT00000031648

38653080 - 38775833

122754

ENSAPLT00000035917

38654795 - 38852391

197597

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38659301_38660700_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: