Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38660880 - 38662815

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGATGG

5'SS Class:

major

3'SS Sequence:

CTAATGTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTTCCCATTT

Flanking Amino Acid:

SASQLEAHNSGTKHKTMLEA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

61.2

40.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.8

0.49

61.9

44.1

Minor 5ss

-2.1

35.2

43.3

Minor BPS

46.2

-0.2

69.4

41.7

Associated Gene:

Gene:

ZNF385D

Ensembl Gene ID:

ENSAPLG00000011365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011818

38654795 - 38891123

236329

ENSAPLT00000031648

38653080 - 38775833

122754

ENSAPLT00000035917

38654795 - 38852391

197597

ENSAPLT00000030968

38654326 - 38900699

246374

ENSAPLT00000035896

38654795 - 38998807

344013

ENSAPLT00000030701

38653080 - 38818407

165328

ENSAPLT00000035325

38653080 - 38818407

165328

ENSAPLT00000026013

38654326 - 38892141

237816

ENSAPLT00000033001

38654326 - 38912237

257912

ENSAPLT00000044739

38654795 - 38854461

199667

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38660880_38662815_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: