Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38718216 - 38746726

Intron Length:

28511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TGAGCCTGATTG

Flanking Amino Acid:

NICQLRFNSDSQAAAHYKGT

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

34.4

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

84.8

0.78

0.7

80.9

24.3

Minor 5ss

-0.9

2.8

53.8

43.7

Minor BPS

46.1

-0.4

1.8

49.9

Associated Gene:

Gene:

ZNF385D

Ensembl Gene ID:

ENSAPLG00000011365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030968

38654326 - 38900699

246374

ENSAPLT00000035896

38654795 - 38998807

344013

ENSAPLT00000030701

38653080 - 38818407

165328

ENSAPLT00000035325

38653080 - 38818407

165328

ENSAPLT00000026013

38654326 - 38892141

237816

ENSAPLT00000033001

38654326 - 38912237

257912

ENSAPLT00000044739

38654795 - 38854461

199667

ENSAPLT00000011818

38654795 - 38891123

236329

ENSAPLT00000031648

38653080 - 38775833

122754

ENSAPLT00000035917

38654795 - 38852391

197597

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38718216_38746726_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: