Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_38786746_38912227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38786746 - 38912227

Intron Length:

125482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TCTTTCTGCACA

Flanking Amino Acid:

MLLGGTCQSPALP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

0.42

1.1

57.3

41.7

Major PPT

70.4

0.46

0.9

65.8

35.1

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

56.3

0.19

1.9

71.44

Associated Gene:

Gene:

ZNF385D

Ensembl Gene ID:

ENSAPLG00000011365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033001

38654326 - 38912237

257912