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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39029394_39031174_R

Intron Information:

Intron Rank:

132122

Intron Class:

major

Intron Phase:

Intron Coordinates:

39029394 - 39031174

Intron Length:

1781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCATACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGCTTTTGAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

71.1

0.47

63.6

41.6

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

-0

1.5

54.71

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022059

39022681 - 39031382

8702