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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39160856_39162167_R

Intron Information:

Intron Rank:

135196

Intron Class:

major

Intron Phase:

Intron Coordinates:

39160856 - 39162167

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTAACCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

CCTATCTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

77.1

0.61

0.9

69.1

36.7

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

69.1

0.58

1.4

70.24

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032980

39151317 - 39172041

20725