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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39160856_39163030_R

Intron Information:

Intron Rank:

135199

Intron Class:

major

Intron Phase:

Intron Coordinates:

39160856 - 39163030

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAC

5'SS Class:

strong_major

3'SS Sequence:

CTTAACCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

CCTATCTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

71.2

34.5

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

77.1

0.61

0.9

69.1

36.7

Minor 5ss

26.8

-2.7

2.9

32.6

42.4

Minor BPS

69.1

0.58

1.4

70.24

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037555

39160700 - 39172154

11455