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Intron Name: Anas_platyrhynchos_platyrhynchos_2_39163183_39171962_R

Intron Information:

Intron Rank:

135198

Intron Class:

major

Intron Phase:

Intron Coordinates:

39163183 - 39171962

Intron Length:

8780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

ACATTTCCAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

59.9

0.25

1.2

38.9

Major PPT

84.8

0.78

0.8

76.9

37.3

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

40.1

-0.7

1.8

46.03

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037555

39160700 - 39172154

11455

ENSAPLT00000032980

39151317 - 39172041

20725